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IIT Kanpur researchers visualize Duffy antigen receptor, advancing the fight against malaria and HIV

Researchers achieve landmark visualization of key Cell Receptor, paving way for new Drugs against infectious diseases. The new milestone can lead the way in combating drug-resistant infections and advancing the fight against diseases like malaria and HIV

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Shukla and team
Professor Arun K. Shukla and his team. Image: By Special arrangement

A research team from the Indian Institute of Technology Kanpur (IITK), led by Prof. Arun K. Shukla from the Department of Biological Sciences and Bioengineering, has achieved a major scientific milestone by visualizing the complete structure of the Duffy antigen receptor for the first time. This receptor protein, located on the surface of red blood cells and other cells, serves as an entry point for harmful pathogens, including the malaria parasite Plasmodium vivax and the bacterium Staphylococcus aureus.

The groundbreaking research, published in peer-reviewed journal Cell, provides valuable new insights for scientists tackling antimicrobial drug resistance. With drug-resistant infections on the rise, this detailed visualization of the Duffy receptor structure could lead to significant advances in developing new therapies for drug-resistant malaria, Staphylococcus infections, and potentially other diseases like HIV.

“For years, researchers worldwide have been working to unravel the secrets of the Duffy antigen receptor due to its role as a ‘gateway’ that helps bacteria and parasites invade our cells and cause disease. Our achievement in finally visualizing this receptor at high resolution will enhance our understanding of how pathogens exploit it to infect cells,” said Prof. Arun K. Shukla from IIT Kanpur.

According to Prof. Arun K. Shukla, this knowledge will aid in the design of next-generation medicines, including new antibiotics and antimalarials, particularly as we face increasing antimicrobial resistance

According to him, this knowledge will aid in the design of next-generation medicines, including new antibiotics and antimalarials, particularly as we face increasing antimicrobial resistance.

“While the Duffy antigen receptor is common in most populations, a significant percentage of people of African descent lack this receptor on their red blood cells due to a genetic variation. As a result, they are naturally resistant to certain types of malaria parasites that rely on this specific ‘gateway’ to infect the cells. This highlights the crucial role of the Duffy antigen receptor in these diseases and suggests that targeting it could lead to new treatments,” added Prof. Shukla.

The research team utilised cutting-edge cryogenic electron microscopy (cryo-EM) to reveal the intricate architecture of the Duffy antigen receptor, illuminating its unique structural features and distinguishing it from similar receptors in the human body. This detailed insight is essential for designing highly targeted therapies that can effectively block infections while minimising unwanted side effects.

Prof. Manindra Agrawal, Director, IIT Kanpur said, “This remarkable achievement is a result of our institution’s support to cutting-edge research that addresses real-world problems and solidifies our standing on the global scientific stage. This will enhance our understanding of infectious diseases and help develop therapies for drug-resistant pathogen.”

The research team comprised Shirsha Saha, Jagannath Maharana, Saloni Sharma, Nashrah Zaidi, Annu Dalal, Sudha Mishra, Manisankar Ganguly, Divyanshu Tiwari, Ramanuj Banerjee, and Prof. Arun Kumar Shukla from IIT Kanpur. Additionally, researchers from CDRI Lucknow, Zurich in Switzerland, Suwon in the Republic of Korea, Tohoku in Japan, and Belfast in the United Kingdom also contributed to the study. This research was primarily funded by the Department of Biotechnology (DBT), the Department of Science and Technology (DST), the Science and Engineering Research Board (SERB), the DBT Wellcome Trust India Alliance, and IIT Kanpur.

Earth

Life may have learned to breathe oxygen hundreds of millions of years earlier than thought

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MIT Study Suggests Life Used Oxygen Far Earlier Than Thought
Researchers mapped enzyme sequences from thousands of modern species onto the evolutionary tree of life. The analysis suggests that soon after cyanobacteria began producing oxygen, other organisms evolved enzymes to use it. Credits: Image: MIT News; figure courtesy of the researchers

Early life on Earth has found an interetsing turning point. A new study by researchers at Massachusetts Institute of Technology suggests that some of Earth’s earliest life forms may have evolved the ability to use oxygen hundreds of millions of years before it became a permanent part of the planet’s atmosphere.

Oxygen is essential to most life on Earth today, but it was not always abundant. Scientists have long believed that oxygen only became a stable component of the atmosphere around 2.3 billion years ago, during a turning point known as the Great Oxidation Event (GOE). The new findings indicate that biological use of oxygen may have begun much earlier, potentially reshaping scientists’ understanding of how life evolved on Earth.

The study, published in the journal Palaeogeography, Palaeoclimatology, Palaeoecology, traces the evolutionary origins of a key enzyme that allows organisms to use oxygen for aerobic respiration. This enzyme is present in most oxygen-breathing life forms today, from bacteria to humans.

MIT geobiologists found that the enzyme likely evolved during the Mesoarchean era, between 3.2 and 2.8 billion years ago—several hundred million years before the Great Oxidation Event.

The findings may help answer a long-standing mystery in Earth’s history: why it took so long for oxygen to accumulate in the atmosphere. Scientists know that cyanobacteria, the first organisms capable of producing oxygen through photosynthesis, emerged around 2.9 billion years ago. Yet atmospheric oxygen levels remained low for hundreds of millions of years after their appearance.

While geochemical reactions with rocks were previously thought to be the main reason oxygen failed to build up early on, the MIT study suggests biology itself may also have played a role. Early organisms that evolved the oxygen-using enzyme may have consumed small amounts of oxygen as soon as it was produced, limiting how much could accumulate in the atmosphere.

“This does dramatically change the story of aerobic respiration,” said Fatima Husain, postdoctoral researcher in MIT’s Department of Earth, Atmospheric and Planetary Sciences, said in a media statement. “Our study adds to this very recently emerging story that life may have used oxygen much earlier than previously thought. It shows us how incredibly innovative life is at all periods in Earth’s history.”

The research team analysed thousands of genetic sequences of heme-copper oxygen reductases—enzymes essential for aerobic respiration—across a wide range of modern organisms. By mapping these sequences onto an evolutionary tree and anchoring them with fossil and geological evidence, the researchers were able to estimate when the enzyme first emerged.

“The puzzle pieces are fitting together and really underscore how life was able to diversify and live in this new, oxygenated world

Tracing the enzyme back through time, the team concluded that oxygen use likely appeared soon after cyanobacteria began producing oxygen. Organisms living close to these microbes may have rapidly consumed the oxygen they released, delaying its escape into the atmosphere.

“Considered all together, MIT research has filled in the gaps in our knowledge of how Earth’s oxygenation proceeded,” Husain said. “The puzzle pieces are fitting together and really underscore how life was able to diversify and live in this new, oxygenated world.”

The study adds to a growing body of evidence suggesting that life on Earth adapted to oxygen far earlier than previously believed, offering new insights into how biological innovation shaped the planet’s atmosphere and the evolution of complex life.

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The Sciences

Researchers crack greener way to mine lithium, cobalt and nickel from dead batteries

A breakthrough recycling method developed at Monash University in Australia can recover over 95% of critical metals from spent lithium-ion batteries—without extreme heat or toxic chemicals—offering a major boost to clean energy and circular economy goals.

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Parisa Biniaz (left), PhD student and co-author, with Dr Parama Banerjee (right), principal supervisor and project lead.
Parisa Biniaz (left), PhD student and co-author, with Dr Parama Banerjee (right), principal supervisor and project lead.

Researchers at Monash University, based in Melbourne, Australia, have developed a breakthrough, environmentally friendly method to recover high-purity nickel, cobalt, manganese and lithium from spent lithium-ion batteries, offering a safer alternative to conventional recycling processes.

The new approach uses a mild and sustainable solvent, avoiding the high temperatures and hazardous chemicals typically associated with battery recycling. The innovation comes at a critical time, as an estimated 500,000 tonnes of spent lithium-ion batteries have already accumulated globally. Despite their growing volume, recycling rates remain low, with only around 10 per cent of spent batteries fully recycled in countries such as Australia.

Most discarded batteries end up in landfills, where toxic substances can seep into soil and groundwater, gradually entering the food chain and posing long-term health and environmental risks. This is particularly concerning given that spent lithium-ion batteries are rich secondary resources, containing strategic metals including lithium, cobalt, nickel, manganese, copper, aluminium and graphite.

Existing recovery methods often extract only a limited range of elements and rely on energy-intensive or chemically aggressive processes. The Monash team’s solution addresses these limitations by combining a novel deep eutectic solvent (DES) with an integrated chemical and electrochemical leaching process.

Dr Parama Banerjee, principal supervisor and project lead from the Department of Chemical and Biological Engineering, said the new method achieves more than 95 per cent recovery of nickel, cobalt, manganese and lithium, even from industrial-grade “black mass” that contains mixed battery chemistries and common impurities.

Banerjee 1
Dr Parama Banerjee

“This is the first report of selective recovery of high-purity Ni, Co, Mn, and Li from spent battery waste using a mild solvent,” Dr Banerjee said.

“Our process not only provides a safer, greener alternative for recycling lithium-ion batteries but also opens pathways to recover valuable metals from other electronic wastes and mine tailings.”

Parisa Biniaz, PhD student and co-author of the study, said the breakthrough represents a significant step towards a circular economy for critical metals while reducing the environmental footprint of battery disposal.

“Our integrated process allows high selectivity and recovery even from complex, mixed battery black mass. The research demonstrates a promising approach for industrial-scale recycling, recovering critical metals efficiently while minimising environmental harm,” Biniaz said.

The researchers say the method could play a key role in supporting sustainable energy transitions by securing critical mineral supplies while cutting down on environmental damage from waste batteries.

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Sustainable Energy

Can ammonia power a low-carbon future? New MIT study maps global costs and emissions

Under what conditions can ammonia truly become a low-carbon energy solution? MIT researchers attempt to resolve this

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Ammonia is being studied as a future low-carbon fuel for hard-to-abate sectors such as aviation. Image credit: RonaK Pitamber Choudhary/Pexels

Ammonia, long known as the backbone of global fertiliser production, is increasingly being examined as a potential pillar of the clean energy transition. Energy-dense, carbon-free at the point of use, and already traded globally at scale, ammonia is emerging as a candidate fuel and a carrier of hydrogen. But its climate promise comes with a contradiction: today’s dominant method of producing ammonia carries a heavy carbon footprint.

A new study by researchers from the MIT Energy Initiative (MITEI) attempts to resolve this tension by answering a foundational question for policymakers and industry alike: under what conditions can ammonia truly become a low-carbon energy solution?

A global view of ammonia’s future

In a paper published in Energy and Environmental Science, the researchers present the largest harmonised dataset to date on the economic and environmental impacts of global ammonia supply chains. The analysis spans 63 countries and evaluates multiple production pathways, trade routes, and energy inputs, offering a comprehensive view of how ammonia could be produced, shipped, and used in a decarbonising world.

“This is the most comprehensive work on the global ammonia landscape,” says senior author Guiyan Zang, a research scientist at MITEI. “We developed many of these frameworks at MIT to be able to make better cost-benefit analyses. Hydrogen and ammonia are the only two types of fuel with no carbon at scale. If we want to use fuel to generate power and heat, but not release carbon, hydrogen and ammonia are the only options, and ammonia is easier to transport and lower-cost.”

Why data matters

Until now, assessments of ammonia’s climate potential have been fragmented. Individual studies often focused on single regions, isolated technologies, or only cost or emissions, making global comparisons difficult.

“Before this, there were no harmonized datasets quantifying the impacts of this transition,” says lead author Woojae Shin, a postdoctoral researcher at MITEI. “Everyone is talking about ammonia as a super important hydrogen carrier in the future, and also ammonia can be directly used in power generation or fertilizer and other industrial uses. But we needed this dataset. It’s filling a major knowledge gap.”

To build the database, the team synthesised results from dozens of prior studies and applied common frameworks to calculate full lifecycle emissions and costs. These calculations included feedstock extraction, production, storage, shipping, and import processing, alongside country-specific factors such as electricity prices, natural gas costs, financing conditions, and energy mix.

Comparing production pathways

Today, most ammonia is produced using the Haber–Bosch process powered by fossil fuels, commonly referred to as “grey ammonia.” In 2020, this process accounted for about 1.8 percent of global greenhouse gas emissions. While economically attractive, it is also the most carbon-intensive option.

The study finds that conventional grey ammonia produced via steam methane reforming (SMR) remains the cheapest option in the U.S. context, at around 48 cents per kilogram. However, it also carries the highest emissions, at 2.46 kilograms of CO₂ equivalent per kilogram of ammonia.

Cleaner alternatives offer substantial emissions reductions at higher cost. Pairing SMR with carbon capture and storage cuts emissions by about 61 percent, with a 29 percent cost increase. A full global shift to ammonia produced with conventional methods plus carbon capture could reduce global greenhouse gas emissions by nearly 71 percent, while raising costs by 23.2 percent.

More advanced “blue ammonia” pathways, such as auto-thermal reforming (ATR) with carbon capture, deliver deeper emissions cuts at relatively modest cost increases. One ATR configuration achieved emissions of 0.75 kilograms of CO₂ equivalent per kilogram of ammonia, at roughly 10 percent higher cost than conventional SMR.

At the far end of the spectrum, “green ammonia” produced using renewable electricity can reduce emissions by as much as 99.7 percent, but at a significantly higher cost—around 46 percent more than today’s baseline. Ammonia produced using nuclear electricity showed near-zero emissions in the analysis.

Geography matters

The study also reveals that the viability of low-carbon ammonia depends heavily on geography. Countries with abundant, low-cost natural gas are better positioned to produce blue ammonia competitively, while regions with cheap renewable electricity are more favourable for green ammonia.

China emerged as a potential future supplier of green ammonia to multiple regions, while parts of the Middle East showed strong competitiveness in low-carbon ammonia production. In contrast, ammonia produced using carbon-intensive grid electricity was often both more expensive and more polluting than conventional methods.

From research to policy

Interest in low-carbon ammonia is no longer theoretical. Countries such as Japan and South Korea have incorporated ammonia into national energy strategies, including pilot projects using ammonia for power generation and financial incentives tied to verified emissions reductions.

“Ammonia researchers, producers, as well as government officials require this data to understand the impact of different technologies and global supply corridors,” Shin says.

Zang adds that the dataset is designed not just as an academic exercise, but as a decision-making tool. “We collaborate with companies, and they need to know the full costs and lifecycle emissions associated with different options. Governments can also use this to compare options and set future policies. Any country producing ammonia needs to know which countries they can deliver to economically.”

As global demand for low-carbon fuels accelerates toward mid-century, the study suggests that ammonia’s role will depend less on ambition alone, and more on informed choices—grounded in data—about how and where it is produced.

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